Pseudomonas aeruginosa PAO1, PA5116

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5116
Name
Replicon chromosome
Genomic location 5762150 - 5762575 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253803.1
GI 15600309
Affymetrix PA5116_at
DNASU PaCD00008201
Entrez 879600
GenBank AAG08501.1
INSDC AAG08501.1
NCBI Locus Tag PA5116
protein_id(GenBank) gb|AAG08501.1|AE004924_6|gnl|PseudoCAP|PA5116
TIGR NTL03PA05117
UniParc UPI00000C5F0D
UniProtKB Acc Q9HU68
UniProtKB ID Q9HU68_PSEAE
UniRef100 UniRef100_W0Z105
UniRef50 UniRef50_Q88F26
UniRef90 UniRef90_A6VDN3

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 10.65
Kyte-Doolittle Hydrophobicity Value -0.167
Molecular Weight (kDa) 15.1
Isoelectric Point (pI) 11.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004709 (367 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5116

Human Homologs

References

No references are associated with this feature.