Pseudomonas aeruginosa PAO1, PA5187

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5187
Name
Replicon chromosome
Genomic location 5839105 - 5840895 (- strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 12 transposon mutants in orthologs

Cross-References

RefSeq NP_253874.1
GI 15600380
Affymetrix PA5187_at
Entrez 881523
GenBank AAG08572.1
INSDC AAG08572.1
NCBI Locus Tag PA5187
protein_id(GenBank) gb|AAG08572.1|AE004931_9|gnl|PseudoCAP|PA5187
TIGR NTL03PA05188
UniParc UPI00000C5F43
UniProtKB Acc Q9HU02
UniProtKB ID Q9HU02_PSEAE
UniRef100 UniRef100_Q9HU02
UniRef50 UniRef50_Q4K4U1
UniRef90 UniRef90_Q9HU02

Product

Feature Type CDS
Coding Frame 1
Product Name
probable acyl-CoA dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -12.45
Kyte-Doolittle Hydrophobicity Value -0.063
Molecular Weight (kDa) 64.6
Isoelectric Point (pI) 5.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 432 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000493 (2496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5187

Human Homologs

Ensembl 110, assembly GRCh38.p14
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 1.3e-25
Percent Identity: 26.1
Ensembl 110, assembly GRCh38.p14
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 1.3e-25
Percent Identity: 26.1
Ensembl 110, assembly GRCh38.p14
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 1.3e-25
Percent Identity: 26.1

References

No references are associated with this feature.