Pseudomonas aeruginosa PAO1, PA5244

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5244
Name
Synonym: yohD
Replicon chromosome
Genomic location 5905871 - 5906461 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253931.1
GI 15600437
Affymetrix PA5244_at
Entrez 880622
GenBank AAG08629.1
INSDC AAG08629.1
NCBI Locus Tag PA5244
protein_id(GenBank) gb|AAG08629.1|AE004937_1|gnl|PseudoCAP|PA5244
TIGR NTL03PA05245
UniParc UPI00000C5F70
UniProtKB Acc Q9HTV0
UniProtKB ID Q9HTV0_PSEAE
UniRef100 UniRef100_W0Z037
UniRef50 UniRef50_X1PTE9
UniRef90 UniRef90_A6VE20

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) 10.70
Kyte-Doolittle Hydrophobicity Value 0.303
Molecular Weight (kDa) 22.1
Isoelectric Point (pI) 10.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 323 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004824 (478 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5244

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295