Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5262
|
Name |
fimS
Synonym: fimS |
Replicon | chromosome |
Genomic location | 5923295 - 5924371 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | Removed AlgZ from name to reflect fact that mutants in this gene do not lose ability to produce alginate. Preferred name changed to FimS. |
RefSeq | NP_253949.1 |
GI | 15600455 |
Affymetrix | PA5262_algZ_at |
DNASU | PaCD00008270 |
Entrez | 879635 |
GenBank | AAG08647.1 |
INSDC | AAG08647.1 |
NCBI Locus Tag | PA5262 |
protein_id(GenBank) | gb|AAG08647.1|AE004938_9|gnl|PseudoCAP|PA5262 |
TIGR | NTL03PA05263 |
UniParc | UPI00000D422F |
UniProtKB Acc | G3XCZ2 |
UniProtKB ID | G3XCZ2_PSEAE |
UniRef100 | UniRef100_W0Z376 |
UniRef50 | UniRef50_Q48QD4 |
UniRef90 | UniRef90_A6VE39 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
FimS
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 1.44 |
Kyte-Doolittle Hydrophobicity Value | 0.241 |
Molecular Weight (kDa) | 40.1 |
Isoelectric Point (pI) | 7.44 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | VFDB : VF0091 |
Category | Alginate regulation |
Evidence |
|
Host Organism | |
Notes | |
Reference |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 316 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004843 (379 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5262
Search term: fimS
Search term: FimS
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Identification of the algZ gene upstream of the response regulator algR and its participation in control of alginate production in Pseudomonas aeruginosa.
Yu H, Mudd M, Boucher JC, Schurr MJ, Deretic V
J Bacteriol 1997 Jan;179(1):187-93
PubMed ID: 8981997
|