Pseudomonas aeruginosa PAO1, PA5330

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5330
Name
Replicon chromosome
Genomic location 6000761 - 6001378 (- strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_254017.1
GI 15600523
Affymetrix PA5330_at
DNASU PaCD00008302
Entrez 878226
GenBank AAG08715.1
INSDC AAG08715.1
NCBI Locus Tag PA5330
protein_id(GenBank) gb|AAG08715.1|AE004945_9|gnl|PseudoCAP|PA5330
TIGR NTL03PA05331
UniParc UPI00000C5FAB
UniProtKB Acc Q9HTM5
UniProtKB ID Q9HTM5_PSEAE
UniRef100 UniRef100_Q9HTM5
UniRef50 UniRef50_U2AXQ2
UniRef90 UniRef90_Z2D7H3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 2.96
Kyte-Doolittle Hydrophobicity Value -0.474
Molecular Weight (kDa) 22.4
Isoelectric Point (pI) 9.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 25 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004899 (378 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5330

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295