Pseudomonas aeruginosa PAO1, PA5466

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5466
Name
Replicon chromosome
Genomic location 6155271 - 6156215 (+ strand)
Transposon Mutants 5 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254153.1
GI 15600659
Affymetrix PA5466_at
Entrez 879737
GenBank AAG08851.1
INSDC AAG08851.1
NCBI Locus Tag PA5466
protein_id(GenBank) gb|AAG08851.1|AE004959_7|gnl|PseudoCAP|PA5466
TIGR NTL03PA05467
UniParc UPI00000C601F
UniProtKB Acc Q9HTA4
UniProtKB ID Q9HTA4_PSEAE
UniRef100 UniRef100_W0Z203
UniRef50 UniRef50_B4ETU8
UniRef90 UniRef90_A6VEU0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 6.34
Kyte-Doolittle Hydrophobicity Value 0.928
Molecular Weight (kDa) 32.8
Isoelectric Point (pI) 9.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 225 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005009 (408 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5466

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295