Pseudomonas aeruginosa PAO1, PA5524

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5524
Name
Replicon chromosome
Genomic location 6217313 - 6218095 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_254211.1
GI 15600717
Affymetrix PA5524_at
DNASU PaCD00008379
Entrez 878183
GenBank AAG08909.1
INSDC AAG08909.1
NCBI Locus Tag PA5524
protein_id(GenBank) gb|AAG08909.1|AE004965_1|gnl|PseudoCAP|PA5524
TIGR NTL03PA05525
UniParc UPI00000C6053
UniProtKB Acc Q9HT49
UniProtKB ID Q9HT49_PSEAE
UniRef100 UniRef100_W0YZW3
UniRef50 UniRef50_A0A022P2F6
UniRef90 UniRef90_A0A022P2F6

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -3.82
Kyte-Doolittle Hydrophobicity Value -0.003
Molecular Weight (kDa) 27.2
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004743 (714 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5524

Human Homologs

Ensembl 94, assembly GRCh38.p12
hydroxysteroid 17-beta dehydrogenase 10 [Source:HGNC Symbol;Acc:HGNC:4800]
E-value: 6.7e-17
Percent Identity: 34.6

References

No references are associated with this feature.