Pseudomonas aeruginosa PAO1, PA5533

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5533
Name
Replicon chromosome
Genomic location 6227082 - 6227450 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254220.1
GI 15600726
Affymetrix PA5533_at
DNASU PaCD00008382
Entrez 878140
GenBank AAG08918.1
INSDC AAG08918.1
NCBI Locus Tag PA5533
protein_id(GenBank) gb|AAG08918.1|AE004965_10|gnl|PseudoCAP|PA5533
TIGR NTL03PA05534
UniParc UPI00000C605B
UniProtKB Acc Q9HT41
UniProtKB ID Q9HT41_PSEAE
UniRef100 UniRef100_W0Z2X6
UniRef50 UniRef50_Q02DH5
UniRef90 UniRef90_Q02DH5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) 2.01
Kyte-Doolittle Hydrophobicity Value -0.250
Molecular Weight (kDa) 13.7
Isoelectric Point (pI) 8.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005066 (429 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5533

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295