Pseudomonas aeruginosa PAO1, PA5555 (atpG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5555
Name
atpG
Synonym: papC
Synonym: uncG
Replicon chromosome
Genomic location 6249685 - 6250545 (- strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254242.1
GI 15600748
Affymetrix PA5555_atpG_at
Entrez 877751
GenBank AAG08940.1
INSDC AAG08940.1
NCBI Locus Tag PA5555
protein_id(GenBank) gb|AAG08940.1|AE004967_11|gnl|PseudoCAP|PA5555
TIGR NTL03PA05556
UniParc UPI00000C606F
UniProtKB Acc Q9HT19
UniProtKB ID ATPG_PSEAE
UniRef100 UniRef100_A6VF33
UniRef50 UniRef50_Q87TT3
UniRef90 UniRef90_Q87TT3

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP synthase gamma chain
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Detected using LC-MS/MS (31.55 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 2.11
Kyte-Doolittle Hydrophobicity Value -0.134
Molecular Weight (kDa) 31.6
Isoelectric Point (pI) 8.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Outer Membrane Vesicle Class 1
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 562 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005086 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5555
Search term: atpG

Human Homologs

Ensembl 94, assembly GRCh38.p12
ATP synthase F1 subunit gamma [Source:HGNC Symbol;Acc:HGNC:833]
E-value: 3.3e-17
Percent Identity: 27.7

References

The atp operon: nucleotide sequence of the genes for the gamma, beta, and epsilon subunits of Escherichia coli ATP synthase.
Saraste M, Gay NJ, Eberle A, Runswick MJ, Walker JE
Nucleic Acids Res. 1981 Oct;9(20):5287-96
PubMed ID: 6272217
H(+)-ATPase gamma subunit of Escherichia coli. Role of the conserved carboxyl-terminal region.
Iwamoto A, Miki J, Maeda M, Futai M
J. Biol. Chem. 1990 Mar;265(9):5043-8
PubMed ID: 2138624
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344