Pseudomonas aeruginosa PAO1, PA0320 (carO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0320
Name
carO
Synonym: ygiW
Replicon chromosome
Genomic location 359982 - 360332 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249011.1
GI 15595517
Affymetrix PA0320_at
DNASU PaCD00006139
Entrez 878326
GenBank AAG03709.1
INSDC AAG03709.1
NCBI Locus Tag PA0320
protein_id(GenBank) gb|AAG03709.1|AE004470_3|gnl|PseudoCAP|PA0320
TIGR NTL03PA00321
UniParc UPI00000C5003
UniProtKB Acc Q9I6H1
UniProtKB ID Q9I6H1_PSEAE
UniRef100 UniRef100_W0YLF5
UniRef50 UniRef50_W0YLF5
UniRef90 UniRef90_W0YLF5

Product

Feature Type CDS
Coding Frame 1
Product Name
calcium-regulated OB-fold protein CarO
Product Name Confidence: Class 1
Synonyms YgiW
Evidence for Translation
Charge (pH 7) -5.77
Kyte-Doolittle Hydrophobicity Value -0.042
Molecular Weight (kDa) 12.6
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000317 (386 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0320
Search term: carO

References

YgiW homologous gene from Pseudomonas aeruginosa 25W is responsible for tributyltin resistance.
Fukushima K, Kumar SD, Suzuki S
J. Gen. Appl. Microbiol. 2012 ;58(4):283-9
PubMed ID: 22990488
The Pseudomonas aeruginosa PAO1 Two-Component Regulator CarSR Regulates Calcium Homeostasis and Calcium-Induced Virulence Factor Production through Its Regulatory Targets CarO and CarP.
Guragain M, King MM, Williamson KS, Pérez-Osorio AC, Akiyama T, Khanam S, Patrauchan MA, Franklin MJ
J. Bacteriol. 2016 Jan;198(6):951-63
PubMed ID: 26755627