Pseudomonas aeruginosa PAO1, PA0388

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0388
Name
Replicon chromosome
Genomic location 429451 - 429870 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249079.1
GI 15595585
Affymetrix PA0388_at
DNASU PaCD00006167
Entrez 878619
GenBank AAG03777.1
INSDC AAG03777.1
NCBI Locus Tag PA0388
protein_id(GenBank) gb|AAG03777.1|AE004476_7|gnl|PseudoCAP|PA0388
TIGR NTL03PA00389
UniParc UPI00000C503C
UniProtKB Acc Q9I6A7
UniProtKB ID Q9I6A7_PSEAE
UniRef100 UniRef100_W0YKE2
UniRef50 UniRef50_W5IM08
UniRef90 UniRef90_Q02U25

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
Charge (pH 7) 0.20
Kyte-Doolittle Hydrophobicity Value 0.060
Molecular Weight (kDa) 15.3
Isoelectric Point (pI) 7.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3UC2 Structural Genomics, Unknown Function 10/25/11 Crystal structure of a DUF4426 family protein (PA0388) from Pseudomonas aeruginosa PAO1 at 2.09 A resolution PSEUDOMONAS AERUGINOSA 2.09 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 29 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000379 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0388

References

Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994