Pseudomonas aeruginosa PAO1, PA0508

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0508
Name
Replicon chromosome
Genomic location 569002 - 570780 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 12 transposon mutants in orthologs

Cross-References

RefSeq NP_249199.1
GI 15595705
Affymetrix PA0508_at
Entrez 880863
GenBank AAG03897.1
INSDC AAG03897.1
NCBI Locus Tag PA0508
protein_id(GenBank) gb|AAG03897.1|AE004488_1|gnl|PseudoCAP|PA0508
TIGR NTL03PA00509
UniParc UPI00000C5097
UniProtKB Acc Q9I610
UniProtKB ID Q9I610_PSEAE
UniRef100 UniRef100_U9I060
UniRef50 UniRef50_Q4K4U1
UniRef90 UniRef90_A6UYW9

Product

Feature Type CDS
Coding Frame 1
Product Name
probable acyl-CoA dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -13.51
Kyte-Doolittle Hydrophobicity Value -0.035
Molecular Weight (kDa) 63.6
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 430 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000493 (2559 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0508

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 4.5e-24
Percent Identity: 26.8

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 4.5e-24
Percent Identity: 26.8

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 4.5e-24
Percent Identity: 26.8

References

No references are associated with this feature.