Pseudomonas aeruginosa PAO1, PA0562

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0562
Name
Replicon chromosome
Genomic location 619332 - 620006 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249253.1
GI 15595759
Affymetrix PA0562_at
DNASU PaCD00006243
Entrez 878411
GenBank AAG03951.1
INSDC AAG03951.1
NCBI Locus Tag PA0562
protein_id(GenBank) gb|AAG03951.1|AE004492_10|gnl|PseudoCAP|PA0562
TIGR NTL03PA00563
UniParc UPI00000C50B7
UniProtKB Acc Q9I5X4
UniProtKB ID Q9I5X4_PSEAE
UniRef100 UniRef100_W1MUW9
UniRef50 UniRef50_A0A077SAH5
UniRef90 UniRef90_A6UZ25

Product

Feature Type CDS
Coding Frame 1
Product Name
probable hydrolase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -6.37
Kyte-Doolittle Hydrophobicity Value 0.091
Molecular Weight (kDa) 24.2
Isoelectric Point (pI) 5.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 452 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000546 (771 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0562

References

No references are associated with this feature.