Pseudomonas aeruginosa PAO1, PA0723 (coaB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0723
Name
coaB
Replicon chromosome
Genomic location 790986 - 791234 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249414.1
GI 15595920
Affymetrix PA0723_coaB_at
DNASU PaCD00006332
Entrez 880778
GenBank AAG04112.1
INSDC ACS36651.1
NCBI Locus Tag PA0723
protein_id(GenBank) gb|AAG04112.1|AE004507_11|gnl|PseudoCAP|PA0723
TIGR NTL03PA00724
UniParc UPI00000C511F
UniProtKB Acc Q9I5K5
UniProtKB Acc Q9I5K5
UniProtKB ID C6JW45_PSEAE
UniProtKB ID Q9I5K5_PSEAE
UniRef100 UniRef100_P03621
UniRef50 UniRef50_P03621
UniRef90 UniRef90_P03621

Product

Feature Type CDS
Coding Frame 1
Product Name
coat protein B of bacteriophage Pf1
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 3.95
Kyte-Doolittle Hydrophobicity Value 0.717
Molecular Weight (kDa) 8.4
Isoelectric Point (pI) 10.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1PFI VIRUS 04/06/94 PF1 VIRUS STRUCTURE: HELICAL COAT PROTEIN AND DNA WITH PARAXIAL PHOSPHATES PSEUDOMONAS PHAGE PF1 3.0 FIBER DIFFRACTION 100.0
2KLV MEMBRANE PROTEIN 07/08/09 Membrane-bound structure of the Pf1 major coat protein in DHPC micelle PSEUDOMONAS PHAGE PF1 NOT SOLUTION NMR 100.0
1IFN VIRUS 01/31/94 TWO FORMS OF PF1 INOVIRUS: X-RAY DIFFRACTION STUDIES ON A STRUCTURAL PHASE TRANSITION AND A CALCULATED LIBRATION NORMAL MODE OF THE ASYMMETRIC UNIT PSEUDOMONAS PHAGE PF1 4.0 FIBER DIFFRACTION 100.0
1PJF VIRAL PROTEIN 06/02/03 Solid State NMR structure of the Pf1 Major Coat Protein in Magnetically Aligned Bacteriophage PSEUDOMONAS PHAGE PF1 NOT SOLID-STATE NMR 100.0
1ZN5 VIRUS 05/11/05 Solid State NMR Structure of the low-temperature form of the Pf1 Major Coat Protein in Magnetically Aligned Bacteriophage PSEUDOMONAS PHAGE PF1 NOT SOLID-STATE NMR 100.0
4IFM VIRUS 01/16/95 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA PSEUDOMONAS PHAGE PF1 3.3 FIBER DIFFRACTION 100.0
2KSJ VIRAL PROTEIN 01/05/10 Structure and Dynamics of the Membrane-bound form of Pf1 Coat Protein: Implications for Structural Rearrangement During Virus Assembly PSEUDOMONAS PHAGE PF1 NOT SOLUTION NMR, SOLID-STATE NMR 100.0
2XKM VIRAL PROTEIN 07/09/10 Consensus structure of Pf1 filamentous bacteriophage from X-ray fibre diffraction and solid-state NMR PSEUDOMONAS PHAGE PF1 NOT FIBER DIFFRACTION, SOLID-STATE NMR 100.0
2IFN VIRUS 01/16/94 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA PSEUDOMONAS PHAGE PF1 4.0 FIBER DIFFRACTION 100.0
1IFM VIRUS 01/31/94 TWO FORMS OF PF1 INOVIRUS: X-RAY DIFFRACTION STUDIES ON A STRUCTURAL PHASE TRANSITION AND A CALCULATED LIBRATION NORMAL MODE OF THE ASYMMETRIC UNIT PSEUDOMONAS PHAGE PF1 3.3 FIBER DIFFRACTION 100.0
3IFM VIRUS 01/16/94 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA PSEUDOMONAS PHAGE PF1 3.3 FIBER DIFFRACTION 100.0
2IFM VIRUS 01/16/95 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA XANTHOMONAS PHAGE XF 3.3 FIBER DIFFRACTION 100.0
1QL2 VIRUS 08/20/99 Inovirus (Filamentous Bacteriophage) Strain PF1 Major Coat Protein Assembly PSEUDOMONAS PHAGE PF1 3.1 FIBER DIFFRACTION 100.0
1QL1 VIRUS 08/20/99 INOVIRUS (FILAMENTOUS BACTERIOPHAGE) STRAIN PF1 MAJOR COAT PROTEIN ASSEMBLY PSEUDOMONAS PHAGE PF1 3.1 FIBER DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000699 (126 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0723
Search term: coaB

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295
Primary structure and sidechain interactions of PFL filamentous bacterial virus coat protein.
Nakashima Y, Wiseman RL, Konigsberg W, Marvin DA
Nature 1975 Jan;253(5486):68-71
PubMed ID: 1110754