Pseudomonas aeruginosa PAO1, PA0723 (coaB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0723
Name
coaB
Replicon chromosome
Genomic location 790986 - 791234 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249414.1
GI 15595920
Affymetrix PA0723_coaB_at
DNASU PaCD00006332
Entrez 880778
GenBank AAG04112.1
INSDC ACS36651.1
NCBI Locus Tag PA0723
protein_id(GenBank) gb|AAG04112.1|AE004507_11|gnl|PseudoCAP|PA0723
TIGR NTL03PA00724
UniParc UPI00000C511F
UniProtKB Acc Q9I5K5
UniProtKB Acc Q9I5K5
UniProtKB ID C6JW45_PSEAE
UniProtKB ID Q9I5K5_PSEAE
UniRef100 UniRef100_P03621
UniRef50 UniRef50_P03621
UniRef90 UniRef90_P03621

Product

Feature Type CDS
Coding Frame 1
Product Name
coat protein B of bacteriophage Pf1
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 3.95
Kyte-Doolittle Hydrophobicity Value 0.717
Molecular Weight (kDa) 8.4
Isoelectric Point (pI) 10.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1IFN VIRUS 01/31/94 TWO FORMS OF PF1 INOVIRUS: X-RAY DIFFRACTION STUDIES ON A STRUCTURAL PHASE TRANSITION AND A CALCULATED LIBRATION NORMAL MODE OF THE ASYMMETRIC UNIT PSEUDOMONAS PHAGE PF1 4.0 FIBER DIFFRACTION 100.0
1PFI VIRUS 04/06/94 PF1 VIRUS STRUCTURE: HELICAL COAT PROTEIN AND DNA WITH PARAXIAL PHOSPHATES PSEUDOMONAS PHAGE PF1 3.0 FIBER DIFFRACTION 100.0
1ZN5 VIRUS 05/11/05 Solid State NMR Structure of the low-temperature form of the Pf1 Major Coat Protein in Magnetically Aligned Bacteriophage PSEUDOMONAS PHAGE PF1 NOT SOLID-STATE NMR 100.0
4IFM VIRUS 01/16/95 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA PSEUDOMONAS PHAGE PF1 3.3 FIBER DIFFRACTION 100.0
2IFN VIRUS 01/16/94 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA PSEUDOMONAS PHAGE PF1 4.0 FIBER DIFFRACTION 100.0
2IFM VIRUS 01/16/95 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA XANTHOMONAS PHAGE XF 3.3 FIBER DIFFRACTION 100.0
1QL2 VIRUS 08/20/99 Inovirus (Filamentous Bacteriophage) Strain PF1 Major Coat Protein Assembly PSEUDOMONAS PHAGE PF1 3.1 FIBER DIFFRACTION 100.0
2XKM VIRAL PROTEIN 07/09/10 Consensus structure of Pf1 filamentous bacteriophage from X-ray fibre diffraction and solid-state NMR PSEUDOMONAS PHAGE PF1 NOT FIBER DIFFRACTION, SOLID-STATE NMR 100.0
1IFM VIRUS 01/31/94 TWO FORMS OF PF1 INOVIRUS: X-RAY DIFFRACTION STUDIES ON A STRUCTURAL PHASE TRANSITION AND A CALCULATED LIBRATION NORMAL MODE OF THE ASYMMETRIC UNIT PSEUDOMONAS PHAGE PF1 3.3 FIBER DIFFRACTION 100.0
3IFM VIRUS 01/16/94 PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA PSEUDOMONAS PHAGE PF1 3.3 FIBER DIFFRACTION 100.0
2KSJ VIRAL PROTEIN 01/05/10 Structure and Dynamics of the Membrane-bound form of Pf1 Coat Protein: Implications for Structural Rearrangement During Virus Assembly PSEUDOMONAS PHAGE PF1 NOT SOLUTION NMR, SOLID-STATE NMR 100.0
1QL1 VIRUS 08/20/99 INOVIRUS (FILAMENTOUS BACTERIOPHAGE) STRAIN PF1 MAJOR COAT PROTEIN ASSEMBLY PSEUDOMONAS PHAGE PF1 3.1 FIBER DIFFRACTION 100.0
2KLV MEMBRANE PROTEIN 07/08/09 Membrane-bound structure of the Pf1 major coat protein in DHPC micelle PSEUDOMONAS PHAGE PF1 NOT SOLUTION NMR 100.0
1PJF VIRAL PROTEIN 06/02/03 Solid State NMR structure of the Pf1 Major Coat Protein in Magnetically Aligned Bacteriophage PSEUDOMONAS PHAGE PF1 NOT SOLID-STATE NMR 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000699 (126 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0723
Search term: coaB

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295
Primary structure and sidechain interactions of PFL filamentous bacterial virus coat protein.
Nakashima Y, Wiseman RL, Konigsberg W, Marvin DA
Nature 1975 Jan;253(5486):68-71
PubMed ID: 1110754