Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0807
|
Name |
ampDh3
|
Replicon | chromosome |
Genomic location | 884799 - 885566 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_249498.1 |
GI | 15596004 |
Affymetrix | PA0807_at |
Entrez | 877713 |
GenBank | AAG04196.1 |
INSDC | AAG04196.1 |
NCBI Locus Tag | PA0807 |
protein_id(GenBank) | gb|AAG04196.1|AE004516_1|gnl|PseudoCAP|PA0807 |
TIGR | NTL03PA00808 |
UniParc | UPI00000C5164 |
UniProtKB Acc | Q9I5D1 |
UniProtKB ID | Q9I5D1_PSEAE |
UniRef100 | UniRef100_Q9I5D1 |
UniRef50 | UniRef50_Q9I5D1 |
UniRef90 | UniRef90_Q9I5D1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
AmpDh3
|
Synonyms |
AmpDh3 (changed from conserved hypothetical protein) |
Evidence for Translation |
Detected using LC-MS/MS (28.72 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -2.57 |
Kyte-Doolittle Hydrophobicity Value | -0.415 |
Molecular Weight (kDa) | 28.7 |
Isoelectric Point (pI) | 6.25 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4BXJ | HYDROLASE | 07/12/13 | CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA | PSEUDOMONAS AERUGINOSA PAO1 | 2.35 | X-RAY DIFFRACTION | 100.0 |
4BXE | HYDROLASE/PEPTIDE | 07/10/13 | CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANHYDROMURAMIC PENTAPEPTIDE | PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT | 2.95 | X-RAY DIFFRACTION | 100.0 |
4BXD | HYDROLASE/PEPTIDE | 07/10/13 | CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE | PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT | 3.1 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 226 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000780 (358 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0807
Search term: ampDh3
Search term: AmpDh3
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Stepwise upregulation of the Pseudomonas aeruginosa chromosomal cephalosporinase conferring high-level beta-lactam resistance involves three AmpD homologues.
Juan C, Moyá B, Pérez JL, Oliver A
Antimicrob Agents Chemother 2006 May;50(5):1780-7
PubMed ID: 16641450
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|