Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0861
|
Name |
rbdA
|
Replicon | chromosome |
Genomic location | 940117 - 942573 (+ strand) |
Transposon Mutants | 8 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 4 transposon mutants in orthologs |
RefSeq | NP_249552.1 |
GI | 15596058 |
Affymetrix | PA0861_at |
Entrez | 882259 |
GenBank | AAG04250.1 |
INSDC | AAG04250.1 |
NCBI Locus Tag | PA0861 |
protein_id(GenBank) | gb|AAG04250.1|AE004521_1|gnl|PseudoCAP|PA0861 |
TIGR | NTL03PA00862 |
UniParc | UPI00000C5193 |
UniProtKB Acc | Q9I580 |
UniProtKB ID | Q9I580_PSEAE |
UniRef100 | UniRef100_Q9I580 |
UniRef50 | UniRef50_D7I2P9 |
UniRef90 | UniRef90_Q9I580 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RbDA
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -25.63 |
Kyte-Doolittle Hydrophobicity Value | -0.070 |
Molecular Weight (kDa) | 91.2 |
Isoelectric Point (pI) | 4.97 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5XGE | TRANSCRIPTION | 04/13/17 | Crystal structure of the PAS-GGDEF-EAL domain of PA0861 from Pseudomonas aeruginosa in complex with cyclic di-GMP | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3.31 | X-RAY DIFFRACTION | 100.0 |
5XGD | TRANSCRIPTION | 04/13/17 | Crystal structure of the PAS-GGDEF-EAL domain of PA0861 from Pseudomonas aeruginosa in complex with GTP | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.8 | X-RAY DIFFRACTION | 100.0 |
5XGB | TRANSCRIPTION | 04/13/17 | Crystal structure of the PAS-GGDEF-EAL domain of PA0861 from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.28 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 477 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000828 (485 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0861
Search term: rbdA
Search term: RbDA
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
The phosphodiesterase DipA (PA5017) is essential for Pseudomonas aeruginosa biofilm dispersion.
Roy AB, Petrova OE, Sauer K
J Bacteriol 2012 Jun;194(11):2904-15
PubMed ID: 22493016
|