Pseudomonas aeruginosa PAO1, PA0942

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0942
Name
Replicon chromosome
Genomic location 1030772 - 1031332 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249633.1
GI 15596139
Affymetrix PA0942_at
DNASU PaCD00006430
Entrez 879528
GenBank AAG04331.1
INSDC AAG04331.1
NCBI Locus Tag PA0942
protein_id(GenBank) gb|AAG04331.1|AE004528_9|gnl|PseudoCAP|PA0942
TIGR NTL03PA00943
UniParc UPI00000C51CE
UniProtKB Acc Q9I516
UniProtKB ID Q9I516_PSEAE
UniRef100 UniRef100_A0A072ZZG7
UniRef50 UniRef50_A8GIC8
UniRef90 UniRef90_W0YPF3

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 1.01
Kyte-Doolittle Hydrophobicity Value -0.154
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 7.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 120 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000908 (328 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0942

References

No references are associated with this feature.