Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1025
|
Name |
opdD
Synonym: opdD |
Replicon | chromosome |
Genomic location | 1110947 - 1112197 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_249716.1 |
GI | 15596222 |
Affymetrix | PA1025_at |
DNASU | PaCD00006470 |
Entrez | 880285 |
GenBank | AAG04414.1 |
INSDC | AAG04414.1 |
NCBI Locus Tag | PA1025 |
protein_id(GenBank) | gb|AAG04414.1|AE004535_1|gnl|PseudoCAP|PA1025 |
TIGR | NTL03PA01026 |
UniParc | UPI00000C520D |
UniProtKB Acc | Q9I4U9 |
UniProtKB ID | Q9I4U9_PSEAE |
UniRef100 | UniRef100_Q9I4U9 |
UniRef50 | UniRef50_W6QYC2 |
UniRef90 | UniRef90_Q9I4U9 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
OpdD
|
Synonyms |
Occk7 |
Evidence for Translation | |
Charge (pH 7) | 0.41 |
Kyte-Doolittle Hydrophobicity Value | -0.414 |
Molecular Weight (kDa) | 46.5 |
Isoelectric Point (pI) | 7.10 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4FRT | TRANSPORT PROTEIN | 06/26/12 | Crystal Structure of Pseudomonas aeruginosa OccK7 (OpdD) | Pseudomonas aeruginosa | 3.166 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 19 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000987 (294 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1025
Search term: opdD
Search term: OpdD
|
Responses of carbapenemase-producing and non-producing carbapenem-resistant Pseudomonas aeruginosa strains to meropenem revealed by quantitative tandem mass spectrometry proteomics.
Salvà-Serra F, Jaén-Luchoro D, Marathe NP, Adlerberth I, Moore ERB, Karlsson R
Front Microbiol 2022;13:1089140
PubMed ID: 36845973
|
Role of the novel OprD family of porins in nutrient uptake in Pseudomonas aeruginosa.
Tamber S, Ochs MM, Hancock RE
J Bacteriol 2006 Jan;188(1):45-54
PubMed ID: 16352820
|
OccK channels from Pseudomonas aeruginosa exhibit diverse single-channel electrical signatures but conserved anion selectivity.
Liu J, Eren E, Vijayaraghavan J, Cheneke BR, Indic M, van den Berg B, Movileanu L
Biochemistry 2012 Mar 20;51(11):2319-30
PubMed ID: 22369314
|