Pseudomonas aeruginosa PAO1, PA1122

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1122
Name
Synonym: def
Synonym: fms
Synonym: pdf
Replicon chromosome
Genomic location 1215284 - 1215727 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249813
GI 15596319
Affymetrix PA1122_at
Entrez 878310
GenBank AAG04511.1
NCBI Locus Tag PA1122
protein_id(GenBank) gb|AAG04511.1|AE004542_7|gnl|PseudoCAP|PA1122
TIGR NTL03PA01123
UniProtKB Acc Q9I4L3
UniProtKB ID Q9I4L3_PSEAE

Product

Feature Type CDS
Coding Frame 1
Product Name
putative peptide deformylase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.34
Kyte-Doolittle Hydrophobicity Value -0.307
Molecular Weight (kDa) 16.3
Isoelectric Point (pI) 4.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 568 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001082 (498 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1122

References

Evidence that peptide deformylase and methionyl-tRNA(fMet) formyltransferase are encoded within the same operon in Escherichia coli.
Meinnel T, Blanquet S
J. Bacteriol. 1993 Dec;175(23):7737-40
PubMed ID: 8244948
A new subclass of the zinc metalloproteases superfamily revealed by the solution structure of peptide deformylase.
Meinnel T, Blanquet S, Dardel F
J. Mol. Biol. 1996 Sep;262(3):375-86
PubMed ID: 8845003