Pseudomonas aeruginosa PAO1, PA1276 (cobC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1276
Name
cobC
Synonym: cobD
Replicon chromosome
Genomic location 1387254 - 1388249 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_249967.1
GI 15596473
Affymetrix PA1276_cobC_at
Entrez 881414
GenBank AAG04665.1
INSDC AAG04665.1
NCBI Locus Tag PA1276
protein_id(GenBank) gb|AAG04665.1|AE004557_6|gnl|PseudoCAP|PA1276
TIGR NTL03PA01277
UniParc UPI00000C52E4
UniProtKB Acc Q9I468
UniProtKB ID COBC_PSEAE
UniRef100 UniRef100_Q9I468
UniRef50 UniRef50_Q9I468
UniRef90 UniRef90_Q9I468

Product

Feature Type CDS
Coding Frame 1
Product Name
cobalamin biosynthetic protein CobC
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 3.02
Kyte-Doolittle Hydrophobicity Value -0.224
Molecular Weight (kDa) 36.7
Isoelectric Point (pI) 7.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001223 (547 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1276
Search term: cobC

References

No references are associated with this feature.