Pseudomonas aeruginosa PAO1, PA1284

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1284
Name
Replicon chromosome
Genomic location 1394779 - 1396599 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 12 transposon mutants in orthologs

Cross-References

RefSeq NP_249975.1
GI 15596481
Affymetrix PA1284_at
Entrez 881436
GenBank AAG04673.1
INSDC AAG04673.1
NCBI Locus Tag PA1284
protein_id(GenBank) gb|AAG04673.1|AE004558_2|gnl|PseudoCAP|PA1284
TIGR NTL03PA01285
UniParc UPI00000C52EC
UniProtKB Acc Q9I460
UniProtKB ID Q9I460_PSEAE
UniRef100 UniRef100_V6AIM6
UniRef50 UniRef50_D6CM31
UniRef90 UniRef90_A6V8S5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable acyl-CoA dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 2.08
Kyte-Doolittle Hydrophobicity Value -0.188
Molecular Weight (kDa) 66.2
Isoelectric Point (pI) 7.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 433 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000493 (2559 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1284

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 1.6e-24
Percent Identity: 26.4

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 1.6e-24
Percent Identity: 26.4

Human Homologs

Ensembl 97, assembly GRCh38.p12
acyl-CoA dehydrogenase very long chain [Source:HGNC Symbol;Acc:HGNC:92]
E-value: 1.6e-24
Percent Identity: 26.4

References

No references are associated with this feature.