Pseudomonas aeruginosa PAO1, PA1363

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1363
Name
Replicon chromosome
Genomic location 1474727 - 1475467 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1

Cross-References

RefSeq NP_250054.1
GI 15596560
Affymetrix PA1363_at
Entrez 880964
GenBank AAG04752.1
INSDC AAG04752.1
NCBI Locus Tag PA1363
protein_id(GenBank) gb|AAG04752.1|AE004565_11|gnl|PseudoCAP|PA1363
TIGR NTL03PA01364
UniParc UPI00000C5339
UniProtKB Acc Q9I3Y1
UniProtKB ID Q9I3Y1_PSEAE
UniRef100 UniRef100_K1DP99
UniRef50 UniRef50_Q02JK4
UniRef90 UniRef90_Q02JK4

Product

Feature Type CDS
Coding Frame 1
Product Name
ECF sigma factor
Product Name Confidence: Class 2
Synonyms probable sigma-70 factor, ECF subfamily
Evidence for Translation
Charge (pH 7) 7.16
Kyte-Doolittle Hydrophobicity Value -0.322
Molecular Weight (kDa) 27.2
Isoelectric Point (pI) 8.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001297 (338 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1363
Search term: ECF sigma factor

References

Characterization of five novel Pseudomonas aeruginosa cell-surface signalling systems.
Llamas MA, Mooij MJ, Sparrius M, Vandenbroucke-Grauls CM, Ratledge C, Bitter W
Mol. Microbiol. 2008 Jan;67(2):458-72
PubMed ID: 18086184