Pseudomonas aeruginosa PAO1, PA1410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1410
Name
Synonym: potF1
Replicon chromosome
Genomic location 1534289 - 1535380 (+ strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250101.1
GI 15596607
Affymetrix PA1410_at
DNASU PaCD00006651
Entrez 879430
GenBank AAG04799.1
INSDC AAG04799.1
NCBI Locus Tag PA1410
protein_id(GenBank) gb|AAG04799.1|AE004570_7|gnl|PseudoCAP|PA1410
TIGR NTL03PA01411
UniParc UPI00000C5367
UniProtKB Acc Q9I3T4
UniProtKB ID Q9I3T4_PSEAE
UniRef100 UniRef100_A0A069QCD2
UniRef50 UniRef50_B2VC45
UniRef90 UniRef90_W0WK90

Product

Feature Type CDS
Coding Frame 1
Product Name
probable periplasmic spermidine/putrescine-binding protein
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 0.14
Kyte-Doolittle Hydrophobicity Value -0.276
Molecular Weight (kDa) 40.5
Isoelectric Point (pI) 7.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 2
Periplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 305 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001331 (321 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1410

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Characteristics of the operon for a putrescine transport system that maps at 19 minutes on the Escherichia coli chromosome.
Pistocchi R, Kashiwagi K, Miyamoto S, Nukui E, Sadakata Y, Kobayashi H, Igarashi K
J. Biol. Chem. 1993 Jan;268(1):146-52
PubMed ID: 8416922