Pseudomonas aeruginosa PAO1, PA1478

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1478
Name
Synonym: pfcyt2
Synonym: cycX
Synonym: ccmD
Synonym: helD
Replicon chromosome
Genomic location 1604426 - 1604602 (+ strand)

Cross-References

RefSeq NP_250169.1
GI 15596675
Affymetrix PA1478_at
DNASU PaCD00006682
Entrez 880954
GenBank AAG04867.1
INSDC AAG04867.1
NCBI Locus Tag PA1478
protein_id(GenBank) gb|AAG04867.1|AE004577_2|gnl|PseudoCAP|PA1478
TIGR NTL03PA01479
UniParc UPI00000C5399
UniProtKB Acc Q9I3N4
UniProtKB ID CCMD_PSEAE
UniRef100 UniRef100_Q9I3N4
UniRef50 UniRef50_Q9I3N4
UniRef90 UniRef90_Q9I3N4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) 1.46
Kyte-Doolittle Hydrophobicity Value -0.153
Molecular Weight (kDa) 6.7
Isoelectric Point (pI) 9.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 36 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001393 (546 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1478

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295