Pseudomonas aeruginosa PAO1, PA1969

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1969
Name
Replicon chromosome
Genomic location 2150828 - 2151220 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250659.1
GI 15597165
Affymetrix PA1969_at
DNASU PaCD00006885
Entrez 878387
GenBank AAG05357.1
INSDC AAG05357.1
NCBI Locus Tag PA1969
protein_id(GenBank) gb|AAG05357.1|AE004623_7|gnl|PseudoCAP|PA1969
TIGR NTL03PA01969
UniParc UPI00000C5537
UniProtKB Acc Q9I2D5
UniProtKB ID Q9I2D5_PSEAE
UniRef100 UniRef100_Q9I2D5
UniRef50 UniRef50_Q9I2D5
UniRef90 UniRef90_Q9I2D5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (13.33 kDa, PMID:21751344)
Charge (pH 7) 3.13
Kyte-Doolittle Hydrophobicity Value -0.085
Molecular Weight (kDa) 13.3
Isoelectric Point (pI) 8.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Vesicle Class 1
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 25 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003464 (408 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1969

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344