Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2364
|
Name |
lip3
|
Replicon | chromosome |
Genomic location | 2614208 - 2614684 (- strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_251054.1 |
GI | 15597560 |
Affymetrix | PA2364_at |
DNASU | PaCD00007034 |
Entrez | 882201 |
GenBank | AAG05752.1 |
INSDC | AAG05752.1 |
NCBI Locus Tag | PA2364 |
protein_id(GenBank) | gb|AAG05752.1|AE004662_7|gnl|PseudoCAP|PA2364 |
TIGR | NTL03PA02364 |
UniParc | UPI00000C5690 |
UniProtKB Acc | Q9I1B5 |
UniProtKB ID | Q9I1B5_PSEAE |
UniRef100 | UniRef100_Q9I1B5 |
UniRef50 | UniRef50_G8QBI0 |
UniRef90 | UniRef90_Q9I1B5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Lip3
|
Synonyms |
hypothetical protein |
Evidence for Translation | |
Charge (pH 7) | 3.38 |
Kyte-Doolittle Hydrophobicity Value | -0.170 |
Molecular Weight (kDa) | 18.1 |
Isoelectric Point (pI) | 8.86 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | PseudoCAP |
Category | Hcp secretion island-3 encoded type VI secretion system (H3-T6SS) |
Evidence |
ECO:0000317
genomic context evidence used in manual assertion
|
Host Organism | Caenorhabditis elegans |
Notes | |
Infection model | Caenorhabditis elegans slow killing assay. H3-T6SS rendered inactive via clpV3 deletion. |
Reference | 24204589 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG003156 (329 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2364
Search term: lip3
Search term: Lip3
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus.
Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordoñez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ
Science 2006 Jun 9;312(5779):1526-30
PubMed ID: 16763151
|
Divergent control of two type VI secretion systems by RpoN in Pseudomonas aeruginosa.
Sana TG, Soscia C, Tonglet CM, Garvis S, Bleves S
PLoS One 2013;8(10):e76030
PubMed ID: 24204589
|