Pseudomonas aeruginosa PAO1, PA5400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5400
Name
Replicon chromosome
Genomic location 6080370 - 6081356 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1

Cross-References

RefSeq NP_254087
GI 15600593
Affymetrix PA5400_at
Entrez 882142
GenBank AAG08785.1
NCBI Locus Tag PA5400
protein_id(GenBank) gb|AAG08785.1|AE004952_7|gnl|PseudoCAP|PA5400
TIGR NTL03PA05401
UniProtKB Acc Q9HTG4
UniProtKB ID Q9HTG4_PSEAE

Product

Feature Type CDS
Coding Frame 1
Product Name
probable electron transfer flavoprotein alpha subunit
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -4.46
Kyte-Doolittle Hydrophobicity Value -0.097
Molecular Weight (kDa) 35.0
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 445 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004957 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5400

Human Homologs

Ensembl 94, assembly GRCh38.p12
electron transfer flavoprotein subunit alpha [Source:HGNC Symbol;Acc:HGNC:3481]
E-value: 7.2e-16
Percent Identity: 39.1

References

No references are associated with this feature.