Pseudomonas aeruginosa PAO1, PA5409

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5409
Name
Replicon chromosome
Genomic location 6084550 - 6085110 (- strand)
Transposon Mutants 3 transposon mutants in PAO1

Cross-References

RefSeq NP_254096.1
GI 15600602
Affymetrix PA5409_at
Entrez 880239
GenBank AAG08794.1
INSDC AAG08794.1
NCBI Locus Tag PA5409
protein_id(GenBank) gb|AAG08794.1|AE004953_8|gnl|PseudoCAP|PA5409
TIGR NTL03PA05410
UniParc UPI00000C5FEE
UniProtKB Acc Q9HTF5
UniProtKB ID Q9HTF5_PSEAE
UniRef100 UniRef100_W0Z0K3
UniRef50 UniRef50_A6VEM2
UniRef90 UniRef90_A6VEM2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) 6.22
Kyte-Doolittle Hydrophobicity Value 1.246
Molecular Weight (kDa) 19.9
Isoelectric Point (pI) 10.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 91 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004966 (317 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5409

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295