Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5416
|
Name |
soxB
|
Replicon | chromosome |
Genomic location | 6095363 - 6096613 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
Comment | Strains with transposon mutants in any of the soxBDAG genes are unable to grow on choline, glycine betaine, dimethylglcycine or sarcosine. |
RefSeq | NP_254103.1 |
GI | 15600609 |
Affymetrix | PA5416_soxB_at |
DNASU | PaCD00008339 |
Entrez | 880060 |
GenBank | AAG08801.1 |
INSDC | AAG08801.1 |
NCBI Locus Tag | PA5416 |
protein_id(GenBank) | gb|AAG08801.1|AE004954_3|gnl|PseudoCAP|PA5416 |
TIGR | NTL03PA05417 |
UniParc | UPI00000C5FF3 |
UniProtKB Acc | Q9HTE8 |
UniProtKB ID | Q9HTE8_PSEAE |
UniRef100 | UniRef100_Q9HTE8 |
UniRef50 | UniRef50_O87388 |
UniRef90 | UniRef90_Q9HTE8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
sarcosine oxidase beta subunit
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 4.72 |
Kyte-Doolittle Hydrophobicity Value | -0.180 |
Molecular Weight (kDa) | 45.1 |
Isoelectric Point (pI) | 8.06 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 323 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004970 (512 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5416
Search term: soxB
Search term: sarcosine oxidase beta subunit
|
Cysteine residues in the active site of Corynebacterium sarcosine oxidase.
Suzuki H, Kawamura-Konishi Y
J Biochem 1991 Jun;109(6):909-17
PubMed ID: 1939012
|
Preparation and properties of recombinant corynebacterial sarcosine oxidase: evidence for posttranslational modification during turnover with sarcosine.
Chlumsky LJ, Zhang L, Ramsey AJ, Jorns MS
Biochemistry 1993 Oct 19;32(41):11132-42
PubMed ID: 7692961
|
Identification of two gene clusters and a transcriptional regulator required for Pseudomonas aeruginosa glycine betaine catabolism.
Wargo MJ, Szwergold BS, Hogan DA
J Bacteriol 2008 Apr;190(8):2690-9
PubMed ID: 17951379
|