Pseudomonas aeruginosa PAO1, PA5428

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5428
Name
Replicon chromosome
Genomic location 6108176 - 6109084 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254115.1
GI 15600621
Affymetrix PA5428_at
DNASU PaCD00008345
Entrez 878602
GenBank AAG08813.1
INSDC AAG08813.1
NCBI Locus Tag PA5428
protein_id(GenBank) gb|AAG08813.1|AE004955_7|gnl|PseudoCAP|PA5428
TIGR NTL03PA05429
UniParc UPI00000C5FFD
UniProtKB Acc Q9HTD8
UniProtKB ID Q9HTD8_PSEAE
UniRef100 UniRef100_A0A072ZGL6
UniRef50 UniRef50_Q4K3J8
UniRef90 UniRef90_W0Z0N1

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 0.33
Kyte-Doolittle Hydrophobicity Value 0.078
Molecular Weight (kDa) 33.4
Isoelectric Point (pI) 7.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Cytoplasmic Class 2
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 506 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004981 (549 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5428

References

No references are associated with this feature.