Pseudomonas aeruginosa PAO1, PA5437

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5437
Name
Replicon chromosome
Genomic location 6119961 - 6120896 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254124.1
GI 15600630
Affymetrix PA5437_at
DNASU PaCD00008346
Entrez 877878
GenBank AAG08822.1
INSDC AAG08822.1
NCBI Locus Tag PA5437
protein_id(GenBank) gb|AAG08822.1|AE004956_6|gnl|PseudoCAP|PA5437
TIGR NTL03PA05438
UniParc UPI00000C6006
UniProtKB Acc Q9HTC9
UniProtKB ID Q9HTC9_PSEAE
UniRef100 UniRef100_W0Z1W2
UniRef50 UniRef50_Q4K3G6
UniRef90 UniRef90_A6VEQ1

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 2.57
Kyte-Doolittle Hydrophobicity Value -0.031
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 8.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Cytoplasmic Class 2
Additional evidence for subcellular localization

Virulence Evidence

Source 1
Database Victors : 4209
Category
Evidence ECO:0000315
mutant phenotype evidence used in manual assertion
Host Organism Rattus norvegicus
Notes
Infection model Rat agar bead model of chronic lung infection
Reference 14641575

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 546 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004987 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5437

References

No references are associated with this feature.