Pseudomonas aeruginosa PAO1, PA5475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5475
Name
Replicon chromosome
Genomic location 6165417 - 6165977 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254162.1
GI 15600668
Affymetrix PA5475_at
DNASU PaCD00008358
Entrez 878199
GenBank AAG08860.1
INSDC AAG08860.1
NCBI Locus Tag PA5475
protein_id(GenBank) gb|AAG08860.1|AE004960_3|gnl|PseudoCAP|PA5475
TIGR NTL03PA05476
UniParc UPI00000C6028
UniProtKB Acc Q9HT95
UniProtKB ID Q9HT95_PSEAE
UniRef100 UniRef100_W0YZQ4
UniRef50 UniRef50_Q88HX1
UniRef90 UniRef90_W0YZQ4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -8.74
Kyte-Doolittle Hydrophobicity Value -0.332
Molecular Weight (kDa) 21.0
Isoelectric Point (pI) 4.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 245 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005017 (398 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5475

Human Homologs

References

No references are associated with this feature.