Pseudomonas aeruginosa PAO1, PA5477

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5477
Name
Replicon chromosome
Genomic location 6167783 - 6168823 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254164.1
GI 15600670
Affymetrix PA5477_at
DNASU PaCD00008359
Entrez 877682
GenBank AAG08862.1
INSDC AAG08862.1
NCBI Locus Tag PA5477
protein_id(GenBank) gb|AAG08862.1|AE004960_5|gnl|PseudoCAP|PA5477
TIGR NTL03PA05478
UniParc UPI00000C602A
UniProtKB Acc Q9HT93
UniProtKB ID Q9HT93_PSEAE
UniRef100 UniRef100_Q9HT93
UniRef50 UniRef50_H0JF55
UniRef90 UniRef90_Q9HT93

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 9.88
Kyte-Doolittle Hydrophobicity Value 0.293
Molecular Weight (kDa) 39.3
Isoelectric Point (pI) 10.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 19 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005018 (549 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5477

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295