Pseudomonas aeruginosa PAO1, PA5487

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5487
Name
Replicon chromosome
Genomic location 6178036 - 6180051 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs
CommentOverexpression PA5487 increases pellicle formation

Cross-References

RefSeq NP_254174.1
GI 15600680
Affymetrix PA5487_at
Entrez 877705
GenBank AAG08872.1
INSDC AAG08872.1
NCBI Locus Tag PA5487
protein_id(GenBank) gb|AAG08872.1|AE004961_7|gnl|PseudoCAP|PA5487
TIGR NTL03PA05488
UniParc UPI00000C6032
UniProtKB Acc Q9HT84
UniProtKB ID Q9HT84_PSEAE
UniRef100 UniRef100_W0Z3V0
UniRef50 UniRef50_B1JFI8
UniRef90 UniRef90_W0Z3V0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -32.88
Kyte-Doolittle Hydrophobicity Value -0.480
Molecular Weight (kDa) 74.0
Isoelectric Point (pI) 4.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005027 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5487

References

Tyrosine Phosphatase TpbA of Pseudomonas aeruginosa Controls Extracellular DNA via Cyclic Diguanylic Acid Concentrations.
Ueda A, Wood TK
Environ. Microbiol. 2010 Jun;2(3):449-55
PubMed ID: 21552365