Pseudomonas aeruginosa PAO1, PA5488

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5488
Name
Replicon chromosome
Genomic location 6180048 - 6180926 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_254175.1
GI 15600681
Affymetrix PA5488_at
DNASU PaCD00008363
Entrez 877706
GenBank AAG08873.1
INSDC AAG08873.1
NCBI Locus Tag PA5488
protein_id(GenBank) gb|AAG08873.1|AE004961_8|gnl|PseudoCAP|PA5488
TIGR NTL03PA05489
UniParc UPI00000C6033
UniProtKB Acc Q9HT83
UniProtKB ID Q9HT83_PSEAE
UniRef100 UniRef100_W0Z2R9
UniRef50 UniRef50_Q4KKJ5
UniRef90 UniRef90_W0Z2R9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 1.58
Kyte-Doolittle Hydrophobicity Value -0.381
Molecular Weight (kDa) 32.9
Isoelectric Point (pI) 7.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 84 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005028 (544 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5488

References

No references are associated with this feature.