Pseudomonas aeruginosa PAO1, PA5504

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5504
Name
Replicon chromosome
Genomic location 6196316 - 6196993 (+ strand)
Transposon Mutants 6 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254191.1
GI 15600697
Affymetrix PA5504_at
DNASU PaCD00008372
Entrez 877865
GenBank AAG08889.1
INSDC AAG08889.1
NCBI Locus Tag PA5504
protein_id(GenBank) gb|AAG08889.1|AE004963_2|gnl|PseudoCAP|PA5504
TIGR NTL03PA05505
UniParc UPI00000C603F
UniProtKB Acc Q9HT69
UniProtKB ID Q9HT69_PSEAE
UniRef100 UniRef100_W0Z249
UniRef50 UniRef50_D9QJC2
UniRef90 UniRef90_M4WPY3

Product

Feature Type CDS
Coding Frame 1
Product Name
D-methionine ABC transporter membrane protein
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -0.77
Kyte-Doolittle Hydrophobicity Value 0.979
Molecular Weight (kDa) 24.4
Isoelectric Point (pI) 5.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 376 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005043 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5504

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295