Pseudomonas aeruginosa PAO1, PA5511 (mifR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5511
Name
mifR
Replicon chromosome
Genomic location 6203104 - 6204447 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254198.1
GI 15600704
Affymetrix PA5511_at
Entrez 878064
GenBank AAG08896.1
INSDC AAG08896.1
NCBI Locus Tag PA5511
protein_id(GenBank) gb|AAG08896.1|AE004963_9|gnl|PseudoCAP|PA5511
TIGR NTL03PA05512
UniParc UPI00000C6046
UniProtKB Acc Q9HT62
UniProtKB ID Q9HT62_PSEAE
UniRef100 UniRef100_Q9HT62
UniRef50 UniRef50_P10046
UniRef90 UniRef90_Q9HT62

Product

Feature Type CDS
Coding Frame 1
Product Name
MifR
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -7.73
Kyte-Doolittle Hydrophobicity Value -0.225
Molecular Weight (kDa) 49.6
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Cytoplasmic Class 2
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005049 (549 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5511
Search term: mifR
Search term: MifR

References

Conservation between coding and regulatory elements of Rhizobium meliloti and Rhizobium leguminosarum dct genes.
Jiang J, Gu BH, Albright LM, Nixon BT
J. Bacteriol. 1989 Oct;171(10):5244-53
PubMed ID: 2793824
A novel signaling network essential for regulating Pseudomonas aeruginosa biofilm development.
Petrova OE, Sauer K
PLoS Pathog. 2009 Nov;5(11):e1000668
PubMed ID: 19936057