Pseudomonas aeruginosa PAO1, PA5543

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5543
Name
Replicon chromosome
Genomic location 6235831 - 6236229 (- strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254230.1
GI 15600736
Affymetrix PA5543_at
DNASU PaCD00007311
Entrez 879588
GenBank AAG08928.1
INSDC AAG08928.1
NCBI Locus Tag PA5543
protein_id(GenBank) gb|AAG08928.1|AE004966_10|gnl|PseudoCAP|PA5543
TIGR NTL03PA05544
UniParc UPI00000C6065
UniProtKB Acc Q9HT31
UniProtKB ID Q9HT31_PSEAE
UniRef100 UniRef100_W0YZY7
UniRef50 UniRef50_A4Y139
UniRef90 UniRef90_Q02DG5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -2.41
Kyte-Doolittle Hydrophobicity Value -0.281
Molecular Weight (kDa) 14.8
Isoelectric Point (pI) 5.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 19 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005075 (368 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5543

References

No references are associated with this feature.