Pseudomonas aeruginosa PAO1, PA5564 (gidB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5564
Name
gidB
Replicon chromosome
Genomic location 6256661 - 6257305 (- strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_254251.1
GI 15600757
Affymetrix PA5564_gidB_at
DNASU PaCD00007321
Entrez 877778
GenBank AAG08949.1
INSDC AAG08949.1
NCBI Locus Tag PA5564
protein_id(GenBank) gb|AAG08949.1|AE004968_3|gnl|PseudoCAP|PA5564
TIGR NTL03PA05565
UniParc UPI000012B47E
UniProtKB Acc Q9HT10
UniProtKB ID RSMG_PSEAE
UniRef100 UniRef100_B7V7A1
UniRef50 UniRef50_Q48BF5
UniRef90 UniRef90_B7V7A1

Product

Feature Type CDS
Coding Frame 1
Product Name
glucose inhibited division protein B
Product Name Confidence: Class 2
Synonyms GidB protein
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -3.11
Kyte-Doolittle Hydrophobicity Value -0.199
Molecular Weight (kDa) 23.7
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 564 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005095 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5564
Search term: gidB

References

The replication origin region of Escherichia coli: nucleotide sequence and functional units.
Buhk HJ, Messer W
Gene 1983 Oct;24(2-3):265-79
PubMed ID: 6357950
The promoters of the atp operon of Escherichia coli K12.
Nielsen J, Jørgensen BB, van Meyenburg KV, Hansen FG
Mol Gen Genet 1984;193(1):64-71
PubMed ID: 6318052
Genes and their organization in the replication origin region of the bacterial chromosome.
Ogasawara N, Yoshikawa H
Mol Microbiol 1992 Mar;6(5):629-34
PubMed ID: 1552862