Pseudomonas aeruginosa PAO1, PA5563 (soj)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA5563
Name
soj
Replicon chromosome
Genomic location 6255854 - 6256642 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254250.1
GI 15600756
Affymetrix PA5563_soj_at
DNASU PaCD00007320
Entrez 877777
GenBank AAG08948.1
INSDC AAG08948.1
NCBI Locus Tag PA5563
protein_id(GenBank) gb|AAG08948.1|AE004968_2|gnl|PseudoCAP|PA5563
TIGR NTL03PA05564
UniParc UPI00000C6075
UniProtKB Acc Q9HT11
UniProtKB ID Q9HT11_PSEAE
UniRef100 UniRef100_W0YKG2
UniRef50 UniRef50_J8YEV2
UniRef90 UniRef90_A6VF41

Product

Feature Type CDS
Coding Frame 1
Product Name
chromosome partitioning protein Soj
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -2.17
Kyte-Doolittle Hydrophobicity Value -0.035
Molecular Weight (kDa) 28.6
Isoelectric Point (pI) 6.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005094 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5563
Search term: soj

References

spo0J is required for normal chromosome segregation as well as the initiation of sporulation in Bacillus subtilis.
Ireton K, Gunther NW, Grossman AD
J. Bacteriol. 1994 Sep;176(17):5320-9
PubMed ID: 8071208