Pseudomonas fluorescens Pf0-1, Pfl01_0015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_0015
Name
Replicon chromosome
Genomic location 17178 - 18488 (- strand)

Cross-References

RefSeq YP_345748.1
GI 77456243
Entrez 3717583
INSDC ABA71759.1
NCBI Locus Tag Pfl01_0015
UniParc UPI0000388837
UniProtKB Acc Q3KKE7
UniProtKB ID Q3KKE7_PSEPF
UniRef100 UniRef100_Q3KKE7
UniRef50 UniRef50_Q4KKR1
UniRef90 UniRef90_Q4KKR1

Product

Feature Type CDS
Coding Frame 1
Product Name
Fmu, rRNA SAM-dependent methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 0.18
Kyte-Doolittle Hydrophobicity Value -0.102
Molecular Weight (kDa) 47373.9
Isoelectric Point (pI) 7.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_0015

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 3.4e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 3.4e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 3.4e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 3.4e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 3.4e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 3.4e-28
Percent Identity: 31.8

References

No references are associated with this feature.