Pseudomonas fluorescens Pf0-1, Pfl01_0188

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_0188
Name
Replicon chromosome
Genomic location 226945 - 228222 (+ strand)

Cross-References

RefSeq YP_345921.1
GI 77456416
EC Number 2.6.1.19
Entrez 3717539
INSDC ABA71932.1
NCBI Locus Tag Pfl01_0188
UniParc UPI00003C7A59
UniProtKB Acc Q3KJX4
UniProtKB ID Q3KJX4_PSEPF
UniRef100 UniRef100_Q3KJX4
UniRef50 UniRef50_P22256
UniRef90 UniRef90_G8PZ77

Product

Feature Type CDS
Coding Frame 1
Product Name
4-aminobutyrate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -4.07
Kyte-Doolittle Hydrophobicity Value 0.208
Molecular Weight (kDa) 44825.5
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000263 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_0188

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 3.1e-42
Percent Identity: 30.5

References

No references are associated with this feature.