Pseudomonas fluorescens Pf0-1, Pfl01_1266

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_1266
Name
Replicon	chromosome
Genomic location	1439224 - 1440570 (+ strand)

Cross-References

RefSeq	YP_346998.1
GI	77457493
Entrez	3717381
INSDC	ABA73009.1
NCBI Locus Tag	Pfl01_1266
UniParc	UPI00003C7303
UniProtKB Acc	Q3KGU7
UniProtKB ID	Q3KGU7_PSEPF
UniRef100	UniRef100_Q3KGU7
UniRef50	UniRef50_Q9I6Q3
UniRef90	UniRef90_K9NFP3

Product

Feature Type	CDS
Coding Frame	1
Product Name	benzoate transport
Synonyms
Evidence for Translation
Charge (pH 7)	9.82
Kyte-Doolittle Hydrophobicity Value	0.785
Molecular Weight (kDa)	47350.6
Isoelectric Point (pI)	9.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000234 (2404 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_1266 Search term: benzoate transport

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000439274 solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963] E-value: 2.3e-08 Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14	ENSP00000318103 solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963] E-value: 2.3e-08 Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14	ENSP00000409557 solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963] E-value: 2.3e-08 Percent Identity: 28.6

References