Pseudomonas fluorescens Pf0-1, Pfl01_2505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_2505
Name
Replicon chromosome
Genomic location 2863609 - 2864586 (+ strand)

Cross-References

RefSeq YP_348236.1
GI 77458730
Entrez 3712195
INSDC ABA74246.1
NCBI Locus Tag Pfl01_2505
UniParc UPI00003885BD
UniProtKB Acc Q3KDA9
UniProtKB ID Q3KDA9_PSEPF
UniRef100 UniRef100_Q3KDA9
UniRef50 UniRef50_Q3KDA9
UniRef90 UniRef90_Q3KDA9

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.70
Kyte-Doolittle Hydrophobicity Value -0.125
Molecular Weight (kDa) 36912.9
Isoelectric Point (pI) 5.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000679 (398 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_2505

Human Homologs

References

No references are associated with this feature.