Pseudomonas fluorescens Pf0-1, Pfl01_4086

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4086
Name
Replicon chromosome
Genomic location 4617739 - 4620201 (- strand)

Cross-References

RefSeq YP_349814.1
GI 77460307
Entrez 3712331
INSDC ABA75823.1
NCBI Locus Tag Pfl01_4086
UniParc UPI00005C7C3F
UniProtKB Acc Q3K8T1
UniProtKB ID Q3K8T1_PSEPF
UniRef100 UniRef100_Q3K8T1
UniRef50 UniRef50_D7I2P9
UniRef90 UniRef90_A0A0B7DDM8

Product

Feature Type CDS
Coding Frame 1
Product Name
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -13.07
Kyte-Doolittle Hydrophobicity Value 0.002
Molecular Weight (kDa) 90767.2
Isoelectric Point (pI) 6.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000828 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4086

Human Homologs

References

No references are associated with this feature.