Pseudomonas fluorescens Pf0-1, Pfl01_4934

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4934
Name
Replicon chromosome
Genomic location 5559580 - 5560494 (+ strand)

Cross-References

RefSeq YP_350662.1
GI 77461155
Entrez 3714056
INSDC ABA76671.1
NCBI Locus Tag Pfl01_4934
UniParc UPI0000387931
UniProtKB Acc Q3K6D3
UniProtKB ID Q3K6D3_PSEPF
UniRef100 UniRef100_A0A0C1W3S1
UniRef50 UniRef50_Q4K6E1
UniRef90 UniRef90_Q4K6E1

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.98
Kyte-Doolittle Hydrophobicity Value 0.034
Molecular Weight (kDa) 33.6
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000217 (907 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4934

Human Homologs

References

No references are associated with this feature.