Pseudomonas fluorescens Pf0-1, Pfl01_5008

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_5008
Name
Replicon chromosome
Genomic location 5644984 - 5646867 (+ strand)

Cross-References

RefSeq YP_350736.1
GI 77461229
Entrez 3714674
INSDC ABA76745.1
NCBI Locus Tag Pfl01_5008
UniParc UPI00003880F5
UniProtKB Acc Q3K659
UniProtKB ID Q3K659_PSEPF
UniRef100 UniRef100_Q3K659
UniRef50 UniRef50_Q3K659
UniRef90 UniRef90_Q3K659

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor
Synonyms
Evidence for Translation
Charge (pH 7) -16.80
Kyte-Doolittle Hydrophobicity Value -0.687
Molecular Weight (kDa) 70630.8
Isoelectric Point (pI) 4.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000897 (3061 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_5008

Human Homologs

References

No references are associated with this feature.