Pseudomonas fluorescens F113, PSF113_0016

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0016
Name
Replicon chromosome
Genomic location 19077 - 19865 (+ strand)

Cross-References

RefSeq YP_005205445.1
GI 378947957
Entrez 11828089
NCBI Locus Tag PSF113_0016

Product

Feature Type CDS
Coding Frame 1
Product Name
Short-chain dehydrogenase reductase Sdr
Synonyms
Evidence for Translation
Charge (pH 7) -3.07
Kyte-Doolittle Hydrophobicity Value 0.086
Molecular Weight (kDa) 27757.1
Isoelectric Point (pI) 5.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001279 (409 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0016

Human Homologs

Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349]
E-value: 4.0e-17
Percent Identity: 29.2

References

No references are associated with this feature.