Pseudomonas fluorescens F113, PSF113_0063

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0063
Name
Replicon chromosome
Genomic location 69328 - 70278 (- strand)

Cross-References

RefSeq YP_005205493.1
GI 378948005
Entrez 11828137
INSDC AEV60098.1
NCBI Locus Tag PSF113_0063
UniParc UPI00023B3AB0
UniProtKB Acc G8PX79
UniProtKB ID G8PX79_PSEFL
UniRef100 UniRef100_G8PX79
UniRef50 UniRef50_Q48QH1
UniRef90 UniRef90_G8PX79

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.37
Kyte-Doolittle Hydrophobicity Value 0.035
Molecular Weight (kDa) 35.2
Isoelectric Point (pI) 6.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 515 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000032 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0063

Human Homologs

References

No references are associated with this feature.