Pseudomonas fluorescens F113, PSF113_0138 (trpI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0138
Name
trpI
Replicon chromosome
Genomic location 149538 - 150455 (- strand)

Cross-References

RefSeq YP_005205571.1
GI 378948083
Entrez 11828215
INSDC AEV60176.1
NCBI Locus Tag PSF113_0138
UniParc UPI00023B3B2E
UniProtKB Acc G8PY81
UniProtKB ID G8PY81_PSEFL
UniRef100 UniRef100_G8PY81
UniRef50 UniRef50_P11720
UniRef90 UniRef90_G8PY81

Product

Feature Type CDS
Coding Frame 1
Product Name
protein TrpI
Synonyms
Evidence for Translation
Charge (pH 7) -0.65
Kyte-Doolittle Hydrophobicity Value -0.156
Molecular Weight (kDa) 33435.8
Isoelectric Point (pI) 6.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 377 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000037 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0138
Search term: trpI
Search term: protein TrpI

Human Homologs

References

No references are associated with this feature.